TAP ABI3/VP1 in Phyllostachys heterocycla

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys

Protein source: BambooGDB


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

B3
AP2
Auxin_resp
WRKY

(Domain names are clickable)



List of proteins (30)

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namename additionClick button to show/hide sequence: Download sequence?
PH01000000G1160PH_genemodel_v1 PH01000000..704341..706687 . + . ID=PH01000000G1160;Name=B3 DNA binding domain containing protein, expressed
PH01000017G0270PH_genemodel_v1 PH01000017..181270..183742 . - . ID=PH01000017G0270;Name=B3 DNA binding domain containing protein, expressed
PH01000025G0410PH_genemodel_v1 PH01000025..335642..338722 . + . ID=PH01000025G0410;Name=B3 DNA binding domain containing protein
PH01000025G0470PH_genemodel_v1 PH01000025..363848..369033 . + . ID=PH01000025G0470;Name=B3 DNA binding domain containing protein, expressed
PH01000038G1330PH_genemodel_v1 PH01000038..937863..940432 . - . ID=PH01000038G1330;Name=B3 DNA binding domain containing protein, expressed
PH01000059G1450PH_genemodel_v1 PH01000059..882147..886025 . - . ID=PH01000059G1450;Name=B3 DNA binding domain containing protein
PH01000076G0800PH_genemodel_v1 PH01000076..486295..489193 . - . ID=PH01000076G0800;Name=B3 DNA binding domain containing protein, expressed
PH01000093G0690PH_genemodel_v1 PH01000093..440717..445263 . - . ID=PH01000093G0690;Name=auxin response factor 6, putative, expressed
PH01000115G0880PH_genemodel_v1 PH01000115..598209..601099 . - . ID=PH01000115G0880;Name=B3 DNA binding domain containing protein, expressed
PH01000132G1210PH_genemodel_v1 PH01000132..878461..880564 . - . ID=PH01000132G1210;Name=B3 DNA binding domain containing protein, expressed
PH01000198G0380PH_genemodel_v1 PH01000198..224693..233766 . - . ID=PH01000198G0380;Name=B3 DNA binding domain containing protein, putative, expressed
PH01000246G0410PH_genemodel_v1 PH01000246..266619..268347 . + . ID=PH01000246G0410;Name=B3 DNA binding domain containing protein, expressed
PH01000261G0320PH_genemodel_v1 PH01000261..181840..184785 . - . ID=PH01000261G0320;Name=B3 DNA binding domain containing protein, expressed
PH01000469G0440PH_genemodel_v1 PH01000469..354556..359514 . + . ID=PH01000469G0440;Name=B3 DNA binding domain containing protein, expressed
PH01000479G0550PH_genemodel_v1 PH01000479..363754..367159 . + . ID=PH01000479G0550;Name=B3 DNA binding domain containing protein, expressed
PH01000528G0920PH_genemodel_v1 PH01000528..546017..548936 . + . ID=PH01000528G0920;Name=B3 DNA binding domain containing protein, expressed
PH01000531G0070PH_genemodel_v1 PH01000531..25671..27521 . + . ID=PH01000531G0070;Name=B3 DNA binding domain containing protein, expressed
PH01000819G0520PH_genemodel_v1 PH01000819..380640..382736 . + . ID=PH01000819G0520;Name=B3 DNA binding domain containing protein, expressed
PH01001094G0220PH_genemodel_v1 PH01001094..132956..143216 . + . ID=PH01001094G0220;Name=B3 DNA binding domain containing protein, putative, expressed
PH01001390G0400PH_genemodel_v1 PH01001390..275135..276277 . + . ID=PH01001390G0400;Name=hypothetical_protein
PH01002064G0190PH_genemodel_v1 PH01002064..117989..123794 . + . ID=PH01002064G0190;Name=B3 DNA binding domain containing protein, expressed
PH01002311G0210PH_genemodel_v1 PH01002311..172829..175348 . - . ID=PH01002311G0210;Name=B3 DNA binding domain containing protein, expressed
PH01002321G0340PH_genemodel_v1 PH01002321..229983..233368 . + . ID=PH01002321G0340;Name=B3 DNA binding domain containing protein
PH01003974G0030PH_genemodel_v1 PH01003974..25122..31294 . - . ID=PH01003974G0030;Name=B3 DNA binding domain containing protein, expressed
PH01004526G0170PH_genemodel_v1 PH01004526..93755..95316 . + . ID=PH01004526G0170;Name=auxin response factor, putative, expressed
PH01004739G0010PH_genemodel_v1 PH01004739..8326..11240 . + . ID=PH01004739G0010;Name=B3 DNA binding domain containing protein, expressed
PH01005516G0020PH_genemodel_v1 PH01005516..2460..6549 . + . ID=PH01005516G0020;Name=B3 DNA binding domain containing protein, expressed
PH01006252G0020PH_genemodel_v1 PH01006252..14335..29318 . - . ID=PH01006252G0020;Name=B3 DNA binding domain containing protein, putative, expressed
PH01013505G0010PH_genemodel_v1 PH01013505..77..3568 . - . ID=PH01013505G0010;Name=auxin response factor, putative, expressed
PH01160280G0010PH_genemodel_v1 PH01160280..10..698 . + . ID=PH01160280G0010;Name=B3 DNA binding domain containing protein
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum